New Chado Tables

Tables for Storing Compounds

The compound Table

The compound table is analogous to the Chado feature table although with fewer fields and is meant to house compounds. The table is minimal and may change as the module evolves. The name field must be a unique value for each file and thus can be selected on for finding files.

Column

Type

Null

Default Value

Constraint

compound_id

integer

No

(auto)

Primary Key

name

text

No

uniquename

integer

No

Unique

The compoundprop Table

The compound Table

The compound_dbxref Table

The compound_synonym Table

Tables for Storing Reactions

The reaction Table

The reactionprop Table

The reaction_substrate Table

The reaction_product Table

Tables for Storing Pathways

The pathway Table

The pathwayprop Table

The pathway_dbxref Table

The pathway_reaction Table

The pathway_feature Table

Tables for Storing Networks

The network Table

The networkprop Table

The network_attr Table

The network_attrprop Table

The network_cvterm Table

The network_file Table

The network_node Table

The network_nodeprop Table

The network_feature Table

The network_compound Table

The network_edge Table

The network_edgeprop Table

The network_analysis Table

The network_analysisprop Table

The network_pub Table

The network_layout Table